rs16785817 SNP Detail

Summary

• ID
  rs16785817
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  123
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:130731194 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACACTCTGT CTGCTCCATG
  GTGAGTCCAT AAACAGCCAG GCTTCAGAGA CTGTGGGAGA GCTGGCAGTG GAACTCAGAA
  CCAACCAGGC AGGTCTACTG CCTTCTTTCC TGGGATCCAA CGTCACTGCA CCGTGGATCT
  GAGCTCTGGG AAATGAAGGC CATGAGAGCT TAGGGGAGAC TGCATGTGCC TAGCTCAATG
  M
  TACCTAGAAT AGTCAAGCAC ACACACACAC ACACACACAC ACACACACAC ACACACACAC
  ACACCACCTA GGCCCCCACC TCCACCCCTG CTCTCTGCCG CTTAAATGGA CGAGTGAAAG
  TTAGCCGTTT ACAATGTGTT CTAAGGTTCC AAGGACTGCC AAACACAAAT GTTACAGGCT
  TAGTGTCCGC TCCTTTGACA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	DBA/2J	FVB	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	PERA	SM/J	SPRET/EiJ
ss24737463	Fcamr_JC9045_2	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	DBA/2J	FVB	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	PERA	SM/J	SPRET/EiJ
rs16785817					SNP	C	C	C	C	C	C	C	C	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:130731194 () rs orientation: forward

Symbol	Name	Function Class
Fcamr	Fc receptor, IgA, IgM, high affinity	within coordinates
Tssr8571	transcription start site region 8571	366 bp downstream