rs16785824 SNP Detail

Summary

• ID
  rs16785824
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  123
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:130731587 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTGACAAA CACTTAAGCA
  CCAGGCCCAA CACTAACAAC ATAAAAGTGG AGACCCTATC CTACACATAA AGAAGTCAGT
  AAACAAAGGA ATTACATGAT TAAAAATATA ACTGGTCACT CACTTAATGG GTATTTATAC
  AGGGCTTAGT ATGCATCAGG AGCTGAGGAC AATTCCATTA GCGATAGAAT CCAGTCCTGG
  M
  AGTACTTGCA GCCTGGCATG CTGAGGCAGC CAGGTATAGA CCAGGCAAGA GGGTAACGGA
  TCCTTTCCTC ATGCAGTGGT GCCTACATTT TGTTATGATG GTAATGGGGA GCCACTGAAG
  ATTATAGTGT ATGTGGAGTG TCTATCAGTT AGACTCTAGT CCAGGGACTT GTTCTACAAA
  TCGTTATTGA ATTCACTAAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	FVB	LG/J	LP/J	MRL/MpJ	PERA	SM/J	SPRET/EiJ
ss24737470	Fcamr_JC9045_9	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	FVB	LG/J	LP/J	MRL/MpJ	PERA	SM/J	SPRET/EiJ
rs16785824					SNP	C	C	C	C	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:130731587 () rs orientation: forward

Symbol	Name	Function Class
Fcamr	Fc receptor, IgA, IgM, high affinity	within coordinates
Rr30371	regulatory region 30371	1388 bp distal
Rr30372	regulatory region 30372	within coordinates
Tssr8571	transcription start site region 8571	759 bp downstream