rs16799753 SNP Detail

Summary

• ID
  rs16799753
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  123
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:130731679 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACATGATTA AAAATATAAC
  TGGTCACTCA CTTAATGGGT ATTTATACAG GGCTTAGTAT GCATCAGGAG CTGAGGACAA
  TTCCATTAGC GATAGAATCC AGTCCTGGCA GTACTTGCAG CCTGGCATGC TGAGGCAGCC
  AGGTATAGAC CAGGCAAGAG GGTAACGGAT CCTTTCCTCA TGCAGTGGTG CCTACATTTT
  K
  TTATGATGGT AATGGGGAGC CACTGAAGAT TATAGTGTAT GTGGAGTGTC TATCAGTTAG
  ACTCTAGTCC AGGGACTTGT TCTACAAATC GTTATTGAAT TCACTAACAA GCGAAAGTAC
  TGTGATAATA CTAAAAATGG ATTACTCATG TCTGGCTCAT TGACAAGTCA CAGTGTAGCA
  GCAGTCACCG CTGCTGCTCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	DBA/2J	FVB	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	PERA	SM/J	SPRET/EiJ
ss24754068	Fcamr_JC9046_1	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	G	G	T
SNP Consensus Information
SNP					Consensus Type	129/Sv	DBA/2J	FVB	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	PERA	SM/J	SPRET/EiJ
rs16799753					SNP	G	G	G	G	G	G	G	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:130731679 () rs orientation: forward

Symbol	Name	Function Class
Fcamr	Fc receptor, IgA, IgM, high affinity	Intron
Tssr8571	transcription start site region 8571	851 bp downstream