rs16802928 SNP Detail

Summary

• ID
  rs16802928
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  123
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:120269863 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTGGCTAGA ATCAAGACAG
  CATGATGATC AGAAACCAAG AGAAGCACAC ACCATGCTCA GAGTCAAGGT CATCCTTGAA
  GTTGTGTTTC AGGACGTTGC TCAAGGCAAT CACTACTATG GGGCAGACTT AGTTGCCATG
  TTATTCCCAA ATGATTCTTA AGACTTCTGT AACCAAGAGT ACATAGAGAA AGACTTACAG
  Y
  AACTTCTATA GAAGCCGTTT TGGGGTAACA CACATCTGCA GCCCCAGCAC TAACAACACT
  GAAGCAGAAT TACAAGTGTT TACAGCCTAG GCTGTACTGC AAAACCTTGT CTCAAATAAA
  CCTTCTGTGA CACCAAAACA CTAAAGGTAA AAATCACTCT CCCCAGTGGC CCGCCTCGAG
  ATGACAGAAA AAAAGGAAAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BUB	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	PERA	SM/J	SPRET/EiJ
ss24757714	Mbtps1_JC8885_5	ROCHEBIO	RPAMM	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BUB	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	PERA	SM/J	SPRET/EiJ
rs16802928					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:120269863 () rs orientation: forward

Symbol	Name	Function Class
Mbtps1	membrane-bound transcription factor peptidase, site 1	within coordinates
Tssr83126	transcription start site region 83126	1956 bp downstream