rs16807148 SNP Detail

Summary

• ID
  rs16807148
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  123
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:43424106 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        AGATT TTTCTTCCAT GGGCCTCCTT
  Y
  GCCTTACTTC CCTAGTCAGA TGTGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BUB	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB	LP/J	MOLF	MRL/MpJ	NZB/BlNJ	NZW/Lac	PERA	SM/J	SPRET/EiJ
ss24762024	Prss20-pending_JC9460_3	ROCHEBIO	RPAMM	f	SNP	C		C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	T	C	C	C
ss46018551	mCV24371646	ABI	CRAMUS_MOUSE	r	SNP		A		G							G		A
ss149083629	ENSMUSSNP5333382	ENSEMBL	ENSEMBL_Sanger	r	SNP		A		G									A
SNP Consensus Information
SNP					Consensus Type	129/Sv	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BUB	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB	LP/J	MOLF	MRL/MpJ	NZB/BlNJ	NZW/Lac	PERA	SM/J	SPRET/EiJ
rs16807148					SNP	C	T	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:43424106 () rs orientation: reverse

Symbol	Name	Function Class
Klk11	kallikrein related-peptidase 11	within coordinates
Klk12	kallikrein related-peptidase 12	1101 bp downstream
Tssr66041	transcription start site region 66041	60 bp downstream
Tssr66042	transcription start site region 66042	46 bp downstream
Tssr66043	transcription start site region 66043	34 bp downstream
Tssr66044	transcription start site region 66044	18 bp downstream
Tssr66045	transcription start site region 66045	1584 bp upstream