rs16807149 SNP Detail

Summary

• ID
  rs16807149
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  123
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:43424079 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CCTTA CTTCCCTAGT CAGATGTGGG
  R
  CAAGGCGGGG TAGGCCCAGG CTCTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BUB	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB	LP/J	MOLF	MRL/MpJ	NZB/BlNJ	NZW/Lac	PERA	SM/J	SPRET/EiJ
ss24762025	Prss20-pending_JC9460_4	ROCHEBIO	RPAMM	f	SNP	A		A	A	A	A	A	A	A	A	A	G	G	A	A	G	A	A	G	A	A	G
ss46026638	mCV24371645	ABI	CRAMUS_MOUSE	r	SNP		C		T							T		C
ss149083621	ENSMUSSNP2043817	ENSEMBL	ENSEMBL_Sanger	r	SNP		C		T									C
SNP Consensus Information
SNP					Consensus Type	129/Sv	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BUB	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB	LP/J	MOLF	MRL/MpJ	NZB/BlNJ	NZW/Lac	PERA	SM/J	SPRET/EiJ
rs16807149					SNP	A	G	A	A	A	A	A	A	A	A	A	G	G	A	A	G	A	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:43424079 () rs orientation: reverse

Symbol	Name	Function Class
Klk11	kallikrein related-peptidase 11	within coordinates
Klk12	kallikrein related-peptidase 12	1074 bp downstream
Tssr66041	transcription start site region 66041	33 bp downstream
Tssr66042	transcription start site region 66042	19 bp downstream
Tssr66043	transcription start site region 66043	7 bp downstream
Tssr66044	transcription start site region 66044	within coordinates
Tssr66045	transcription start site region 66045	1611 bp upstream