rs16807166 SNP Detail

Summary

• ID
  rs16807166
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  123
• Last Updated in dbSNP Build
  123
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:43427285 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCCTGAGGG AACCGTGATC CGGGNGGGAG ATGGGGAAAG
  GAGACCAGAT GAATCTTCAG AGAGAAAGAT CAGAGTCACT CAAGAGGCAT GGTGANCTGG
  R
  GCAGTCAGGA GANGGATGAG CTAAAAGGAA GATGAGAAAT TCTGAGGGAC TCACTTTTGG
  GCCTCAAGAC TGAGACAGGT GTGAGGCAGG TGTGAGACAG GTGTGAGGCA GGTGTGAGAC
  AGGTGTGNNN CNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNTtcccaaa
  tctataactt tctagttgtg ggatctaaag caggtggctt tacctctctg aaccttgggt
  tttttttttt tttcctaaaa agaataatca tatctaccta ccacagntgg ggtCAGAGGT
  AATGCACAGA GAACAAGTAG TAGGAAGAAT TTACTCAATG CATTGCTGTT GCNACAGTTA
  CAAGCATAGA GATGGGTTCA GGGCAAGGAT TGTCCCAGGT GCTGGCTACT GTGGTGGGGT
  GGGAAANCCA G                                                     
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BUB	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB	LP/J	MOLF	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss24762042	Prss20-pending_JC9464_3	ROCHEBIO	RPAMM	f	SNP	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BUB	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB	LP/J	MOLF	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs16807166					SNP	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:43427285 () rs orientation: forward

Symbol	Name	Function Class
Klk11	kallikrein related-peptidase 11	within coordinates
Tssr66045	transcription start site region 66045	1563 bp downstream