rs16815573 SNP Detail

Summary

• ID
  rs16815573
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  123
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:137548866 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTGG ATAGACGGCT CAGTAACTAG
  R
  AGCACTGACC ACTTCTATAG AGGAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BUB	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB	LG/J	LP/J	MOLF	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss24770925	Eps8_AN7014_5	ROCHEBIO	RPAMM	f	SNP	G		A	A	A	G	G	G	A	A	G	A	A	A	G	G	G	G	G	A	G	G
ss133873293	ENSMUSSNP3752213	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A									A
SNP Consensus Information
SNP					Consensus Type	129/Sv	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BUB	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB	LG/J	LP/J	MOLF	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs16815573					SNP	G	G	A	A	A	G	G	G	A	A	G	A	A	A	G	G	G	G	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:137548866 () rs orientation: forward

Symbol	Name	Function Class
Eps8	epidermal growth factor receptor pathway substrate 8	within coordinates
Rr640223	regulatory region 640223	1993 bp distal
Rr640224	regulatory region 640224	862 bp distal
Rr640225	regulatory region 640225	361 bp distal
Rr640226	regulatory region 640226	522 bp distal
Tssr63894	transcription start site region 63894	1108 bp upstream
Tssr63895	transcription start site region 63895	1060 bp upstream
Tssr63896	transcription start site region 63896	1037 bp upstream
Tssr63897	transcription start site region 63897	836 bp upstream
Tssr63898	transcription start site region 63898	814 bp upstream