rs16818453 SNP Detail

Summary

• ID
  rs16818453
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  123
• Last Updated in dbSNP Build
  123
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:55566930 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

              Ttcctnttc cttttcctcc tcctcctctt tctccccctn ttcctcTTGT
  TTTGTTtttg ttttttgttt tgaaggcagg gtttctctgt ntagtcccag ctgtccggga
  gctgtccagg anctgtccag ctctgtagac caggctgcct tnaaccttaa gcactccatn
  tgcctttgcc tcccaagtgc tgggattaaa ggcttgcacc tttntggctc agtttntttt
  ttacacaatc caggcccncc tgttcagggn ggcatcactc acagtgggng gggccctttc
  acatcaacca ttaatcaaga aaatgcccgg ggctggggag atggctcagt gggtaagagc
  M
  cccgactgct nttccgaagg tccagagttc aaatcccagc aaccacatgg nngntcacaa
  ccatctgtaa tgagatctgg cgcctttttt tggagtgttt gaagacagct acagtgtact
  tacatataat taataaataa atctttaaaa aaaaaaagaa aatgccctac agatattgcc
  ctaggccaat cttctggagg catctcttcg ggtgaggttc cttcCC               
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	DBA/2J	LP/J	MOLF	NZB/BlNJ	NZW/Lac	PERA	SM/J
ss24773945	F12_AN7151_8	ROCHEBIO	RPAMM	f	SNP	A	A	C	C	A	A	A	C	A	A	A	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	DBA/2J	LP/J	MOLF	NZB/BlNJ	NZW/Lac	PERA	SM/J
rs16818453					SNP	A	A	C	C	A	A	A	C	A	A	A	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:55566930 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi5669	CpG island 5669	542 bp distal
Cpgi5670	CpG island 5670	1005 bp proximal
F12	coagulation factor XII (Hageman factor)	within coordinates
Rr480460	regulatory region 480460	625 bp distal
Rr480461	regulatory region 480461	1560 bp proximal