rs16818615 SNP Detail

Summary

• ID
  rs16818615
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  123
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13089083 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CTGGT GTGCCTATCC AGTTGCACGC
  R
  TGGATAACTC TATTGCATGA CCCTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BUB	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB	LG/J	LP/J	MOLF	MRL/MpJ	NZB/BlNJ	NZW/Lac	PERA	SM/J
ss24774107	F10_AN7119_1	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BUB	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB	LG/J	LP/J	MOLF	MRL/MpJ	NZB/BlNJ	NZW/Lac	PERA	SM/J
rs16818615					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13089083 () rs orientation: reverse

Symbol	Name	Function Class
F10	coagulation factor X	within coordinates
Rr659843	regulatory region 659843	1751 bp distal
Rr659844	regulatory region 659844	1235 bp distal
Rr659845	regulatory region 659845	455 bp distal
Rr659846	regulatory region 659846	1471 bp proximal
Tssr76325	transcription start site region 76325	1780 bp downstream
Tssr76326	transcription start site region 76326	1731 bp downstream
Tssr76327	transcription start site region 76327	1721 bp downstream
Tssr76328	transcription start site region 76328	1693 bp downstream
Tssr76329	transcription start site region 76329	1245 bp downstream
Tssr76330	transcription start site region 76330	1098 bp downstream
Tssr76331	transcription start site region 76331	220 bp upstream
Tssr76332	transcription start site region 76332	243 bp upstream
Tssr76333	transcription start site region 76333	275 bp upstream
Tssr76334	transcription start site region 76334	286 bp upstream
Tssr76335	transcription start site region 76335	454 bp upstream