rs16818740 SNP Detail

Summary

• ID
  rs16818740
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  123
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13087556 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CTCCA ATGCTCACCC CAGCCCTGCT
  R
  GCACTTACCC AGCTGGTAGA GGGGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BUB	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	PERA	SM/J
ss24774233	F10_AN7116_1	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BUB	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	PERA	SM/J
rs16818740					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13087556 () rs orientation: reverse

Symbol	Name	Function Class
F7	coagulation factor VII	1747 bp downstream
F10	coagulation factor X	within coordinates
Rr659843	regulatory region 659843	224 bp distal
Rr659844	regulatory region 659844	within coordinates
Rr659845	regulatory region 659845	293 bp proximal
Tssr76325	transcription start site region 76325	253 bp downstream
Tssr76326	transcription start site region 76326	204 bp downstream
Tssr76327	transcription start site region 76327	194 bp downstream
Tssr76328	transcription start site region 76328	166 bp downstream
Tssr76329	transcription start site region 76329	246 bp upstream
Tssr76330	transcription start site region 76330	420 bp upstream
Tssr76331	transcription start site region 76331	1747 bp upstream
Tssr76332	transcription start site region 76332	1770 bp upstream
Tssr76333	transcription start site region 76333	1802 bp upstream
Tssr76334	transcription start site region 76334	1813 bp upstream
Tssr76335	transcription start site region 76335	1981 bp upstream