rs16821757 SNP Detail

Summary

• ID
  rs16821757
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  123
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82503639 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        AGGAA GGAAGGAAGG AAGGAAGGAA
  R
  GAAGGAAGGA AAGAAGGAAG GAAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BALB/cJ	DBA/2J	MRL/MpJ
ss24777499	Cyp2d26_JC10583_1	ROCHEBIO	RPAMM	f	SNP			A	G	G
ss24777500	Cyp2d26_JC10583_2	ROCHEBIO	RPAMM	f	SNP			G	A	G
ss39402530	mCV25425218	ABI	CRAMUS_MOUSE	r	SNP	C	T
ss148232975	ENSMUSSNP7020402	ENSEMBL	ENSEMBL_Sanger	r	SNP	C	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BALB/cJ	DBA/2J	MRL/MpJ
rs16821757					SNP	G	A	?	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82503639 () rs orientation: reverse

Symbol	Name	Function Class
Cyp2d34	cytochrome P450, family 2, subfamily d, polypeptide 34	within coordinates
Gm49431	predicted gene, 49431	1654 bp upstream
Rr310820	regulatory region 310820	1260 bp proximal
Tssr135558	transcription start site region 135558	1493 bp downstream