rs211700219 SNP Detail

Summary

• ID
  rs211700219
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:17152568 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTTTTTTT TAGGCCGTTT
  AACTCTGTAA GGTCTGTCTT CAGGTCTTTG TCCCATATTG TATTGATTTC AGTGCAGGAT
  GAGGAAAGAT ACAAATATGC TTTTATTCTG TTTTCCCAAG ATTATCTGCT AACATATTTG
  TATTTTTACA GATGTTTGCT TTTGCTGCTG CTATGCAAAA TCACCCAGCA ATGGCTATGA
  R
  GGTTTAGTTC GCATCCCTGT TCGGTGCTAG CACACTGATC TGCATGTTTG TTTTTGTGAT
  GGTACTATGC TATGTTGGTT ACATTAGCTC TGGTTTTATA CTTTGAAATA GGGTACTATG
  TTTCCTTAAA CACTGTATTT TTCTGTGGAG CATTACTTTG AGAGTTTAAA TCTTCTCTAT
  TTGCTTGCTT CAGTTCATGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325539576	CHEV_18_17178020	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211700219					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:17152568 () rs orientation: forward

Symbol	Name	Function Class
Gm58605	predicted gene, 58605	within coordinates
Rr344746	regulatory region 344746	233 bp proximal
Tssr150151	transcription start site region 150151	418 bp downstream
Tssr152558	transcription start site region 152558	526 bp upstream