rs211722538 SNP Detail

Summary

• ID
  rs211722538
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:90651232 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAATGTGT CAAATTCCCT
  TCTGGATTTG TGAACAAACT ATACATAAGA CATTAATGAA TTTCATTCAT GTTTAGACTT
  GGGTTTCATC CCCAAGACAT TTTGTTAGAT ATGTGCAAAA AGTCTAAGAT CCTAAAACGT
  ACATGATAGA AAGCGCTTCT GGCCCTGAGC CTTTCAGATA AAAGATGTTG AACTGGTGAC
  R
  TTCCCTAAAA ATTCCAGTTC GAGTTTGACA TGTTGTCTCT ATCAATGTTC TATTGCTGGG
  AAGAGACACC ACGACCATGG CAAATCTTAT AAATGAGAGC ATTTAACTGG GGCTGGCTTA
  CAGTTCAGAG GTTCAATCCT TTGTCGTCAT GGCAGGAAGC ATGCCAGCAT GCAGGCAGAC
  ATGGTGCTGG AGAGGAACTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320391255	CHEV_2_90661045	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211722538					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:90651232 () rs orientation: forward

Symbol	Name	Function Class
Agbl2	ATP/GTP binding protein-like 2	within coordinates
Rr373531	regulatory region 373531	1734 bp upstream