rs211786254 SNP Detail

Summary

• ID
  rs211786254
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:28527449 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCATGGCTT GTTTCCCAAT TTTCTGTTCT
  GCTGTGAAAC CCACCCAATG ATTTTTTTtt taattttatt ttatgtgcat tggtgtttta
  tgtgcctgtg tgagggtgtc agatagcctg gaactggagt tagagacagt tgtgagctgc
  Y
  atgtgggtgc taggaattga acccgggtcc tctggaagag cagctggtgc tcttaccccc
  gagccatgtc tccagctccC ACCCGGTGAT CATTTTTGCT TCAGGTGTTT TGTTTGCAGT
  CTTCAGATTT CTAGTTGGTT CTTTGTGATG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322126534	CHEV_7_29613043	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211786254					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:28527449 () rs orientation: forward

Symbol	Name	Function Class
Ech1	enoyl coenzyme A hydratase 1, peroxisomal	within coordinates
Rr155798	regulatory region 155798	849 bp distal
Rr167384	regulatory region 167384	1448 bp distal
Tssr65551	transcription start site region 65551	500 bp downstream
Tssr65552	transcription start site region 65552	392 bp downstream
Tssr65553	transcription start site region 65553	1983 bp upstream