rs211786791 SNP Detail

Summary

• ID
  rs211786791
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:32199230 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTTACATA AACTAGGCAA
  CCACTCTACA ATGATTCCCA GGCCCATAAT ATAAGTAGTT TTGTTTTAGA GACACGGTCT
  CTCTCTCTAT ATCCATGACT GTCCAGGAGC CCAGAGATTC ACTGGCCTTT GCCTTCTATA
  GGCTAGTATA AGAGGTGCAC GCCACCATGC CCACCTAATT TTCCAAGGAA AATAAGTAAA
  R
  TTTTCACTGA AAATACATTA GAATCAGACA AGACTTTGTT AGTTTGTAAT GATTTGTTCT
  AATTTCTGTT CCTCATTCTT TCTTCTGTAG CTGATAAGCC TAGGAGAAGG AAGCCGAGGT
  CATTCCCAGT TTCTTTCCAA TGTAGTCCTC TGGGCACTCT AAAGGTTACA CAGTGTCTAT
  CAGCACAAAT TATTTTTTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323630226	CHEV_11_32149230	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211786791					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:32199230 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Nprl3	nitrogen permease regulator-like 3			Intron
				Noncoding-Transcript-Variant
Rr349	regulatory region 349			1574 bp proximal
Rr350	regulatory region 350			within coordinates
Rr923	regulatory region 923			1579 bp proximal
Rr1084	regulatory region 1084			1222 bp proximal
Rr444549	regulatory region 444549			1790 bp distal
Rr444550	regulatory region 444550			1949 bp distal
Rr444551	regulatory region 444551			593 bp distal
Rr444552	regulatory region 444552			1094 bp proximal