rs211820968 SNP Detail

Summary

• ID
  rs211820968
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:96143148 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCATAAGCT TAGGTTGGTT
  GCTCATGGAA AAAAGGGTGA TGTTTATTTG CTGGAAAGAG CAGGAAGGAA GATAATATGA
  ACATAATGAA AGCAGTCGTA TACTTTTTAA AAGTAAATCA GATTCATTAT GAATAAAGTA
  TAAACAAGTA ACACAAAGGG GAATTCTGTG TTCTTATATA ATTTTCACTT ATACATATTA
  K
  AGCTACTCTT TTTGGGGCGG GGGGACCTAT ATGGTCTTAT ATGTAGCTCA GTCTGTTAGA
  ACTTTGGAGG TGGGGGTGGG GGTGGAGGCA GGTACAAGGT TGCACTATGT AGCTCTGACT
  GGCTTGGAAC TCAGCTCGAC CTCCCTCTGC CTCTCTCATG CTGGTTTTAA AGACCTGCTA
  GTTTTAAAGG TGTAAGCCAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323107379	CHEV_9_96161514	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211820968					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:96143148 () rs orientation: forward

Symbol	Name	Function Class
Tfdp2	transcription factor Dp 2	within coordinates
Tssr2975	transcription start site region 2975	1861 bp downstream
Tssr86595	transcription start site region 86595	1834 bp downstream
Tssr86596	transcription start site region 86596	1818 bp downstream