rs211849139 SNP Detail

Summary

• ID
  rs211849139
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:86738532 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAGAAGTAT GACTAGTGTA
  GTGGGTTATA TTATTAGAAG AGGATCTGTC TGGATCAGCC TTATTGTGAA GTAGACCATC
  ATCCTCAGGT TCATGCTGCT GTTGGTAAGA AAGTTGGAGA ATGTAGAAAG AACTTATCTA
  AGAATATGAC AATCCATATG CGTAAAGTAT TATATTTCAC TGAAGATAGA CATAAAACTA
  R
  AAAAAAATCA AGGCTCACAA AATCCAAATT CTGTCTAACA CACTATCTAT CAGTGGAAAC
  ATAGGAAAAT AATATAGCAT CTTTTTGAAA GACAAAATAT AGTTTGGACT ATACAGGAGT
  TTGAGAAAAA TCATTGACCA TATATCAGTT ATTCATTTTA GTCTAAAACA GTAGCATGAA
  TACGACAACA TAGATTTCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321599001	CHEV_5_87019698	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211849139					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:86738532 () rs orientation: forward

Symbol	Name	Function Class
Tmprss11f	transmembrane protease, serine 11f	within coordinates
Tssr51538	transcription start site region 51538	760 bp downstream