rs211857593 SNP Detail

Summary

• ID
  rs211857593
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18909494 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTAT GGCAGAGCGG GCGCAGGGTA
  A
  GGTGTGGGCT GGGCTGGACT ATAGA                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322116604	CHEV_7_19760918	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211857593					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18909494 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18450	CpG island 18450	725 bp proximal
Eml2	echinoderm microtubule associated protein like 2	852 bp upstream
Gm71808	predicted gene, 71808	530 bp downstream
Rr155271	regulatory region 155271	894 bp distal
Rr167138	regulatory region 167138	within coordinates
Tssr64790	transcription start site region 64790	847 bp upstream
Tssr64791	transcription start site region 64791	877 bp upstream
Tssr64792	transcription start site region 64792	914 bp upstream
Tssr64793	transcription start site region 64793	944 bp upstream
Tssr64794	transcription start site region 64794	1079 bp upstream