rs211865251 SNP Detail

Summary

• ID
  rs211865251
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:31051196 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACCTTCAGA AGAGCAGTCG
  GCACTCTTAA CCACTGAGCC ATCTCGCCAG CCCCCCAGGG CATTCTTTTC TGCCTCCAGG
  GGAATACATG TATGCAAATA GATAGACAGA CACAGTAAAT AATAGAAATA AACCTTAAAA
  AGTCTGTTAA AAGCCGGGCG TGGTGGCGCA CACCTTTATT CCCAGTACTG GGGGCGGGGG
  K
  GGGGGGGGGT GGGGGGTGGT GGCAGAGGCA GGTGGATTTC TGAGTTCTAG GCCAGCCTGG
  TTTACAAAGT GAGTTCCAGG ACAGCCAGGG CTATACAGAG AAACCCTGTC TCGAACCCCC
  CTCCCCCCCC CAAAAAAGAA ATGGCTGTAT GCTCCTGGTG TGTGTGTGGG TGTGTGTGAA
  AAAGAAATGG CTGTATGCTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	CE/J	DBA/2J	JF1/MsJ	KK/HlJ	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	QSi3/Ianm	QSi5/Ianm	SPRET/EiJ
ss353531889	MGP_WTSI_2_31016704	EVA_MGPV3	EVA_MGPV3	f	SNP	G	T	G	T	T	G	G	T	G	T	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	CE/J	DBA/2J	JF1/MsJ	KK/HlJ	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	QSi3/Ianm	QSi5/Ianm	SPRET/EiJ
rs211865251					SNP	G	T	G	T	T	G	G	T	G	T	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss353531889	MGP_WTSI_2_31016704	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:31051196 () rs orientation: forward

Symbol	Name	Function Class
Gpr107	G protein-coupled receptor 107	within coordinates
Rr372995	regulatory region 372995	377 bp upstream
Rr554554	regulatory region 554554	236 bp distal