rs211866052 SNP Detail

Summary

• ID
  rs211866052
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:72427252 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTACTGCGA ATTTAGGAAC
  TCATGACCTT TGGAAAAGCA GTCAGTGGTC TTAACTGCTG AGCCAGTTAT TACTCTAGCC
  CTGGATAGGC CCAATATCTA ACCCTGTAAT GAACATGTAA TTTAAAGACC CTGCACTGAA
  TGCTGATCAG GTTGTTTTCA AATCTAAGTG GGCCATCGGT ACTGTTTGTG CAGCCTGGGA
  M
  GCCTGTAGCA TCAGTATCTA CTCCAACTGC ATGTGGGCAG GGGATTGCAA CTTTGATGAA
  CTAGGCTATG TTTCTGGAAA AAACAAACAA ACAAACAAAC AAACAAACAG GTGTCCTATT
  TGACTAAACA GACTTCTATG CCTTGGTATC ACTCTTCAGG GTTGGTACCC CCATGGGATA
  CTACATTCAT CACCATGTTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320343246	CHEV_2_72434965	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211866052					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:72427252 () rs orientation: forward

Symbol	Name	Function Class
Rr558998	regulatory region 558998	761 bp proximal
Tssr18356	transcription start site region 18356	637 bp upstream