rs211869656 SNP Detail

Summary

• ID
  rs211869656
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132900093 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAG GTTCAGGGAG AGACTGTCTG
  Y
  AGAGAGGCTA ATGTCACGGG GCACC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321339079	CHEV_4_132728697	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211869656					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132900093 () rs orientation: forward

Symbol	Name	Function Class
Gm55379	predicted gene, 55379	1068 bp upstream
Gm69072	predicted gene, 69072	within coordinates
Rr367728	regulatory region 367728	1524 bp upstream
Rr601216	regulatory region 601216	1901 bp distal
Rr601217	regulatory region 601217	1387 bp proximal
Tssr1326	transcription start site region 1326	89 bp downstream
Tssr39456	transcription start site region 39456	1689 bp upstream
Tssr39457	transcription start site region 39457	1743 bp upstream
Tssr39458	transcription start site region 39458	1757 bp upstream
Wasf2	WASP family, member 2	within coordinates