rs211875842 SNP Detail

Summary

• ID
  rs211875842
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:8686061 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    acatataca catatacata cacatgttta
  taaatatatt aatacatata tatacacata tacatatata cctatacaaa gacatatata
  cctgtgcata tgcatttata tacatataac tatacataca tatatgtata cacacacaca
  M
  atacatacat acatacatTC TTTAGTTACA TATAAatata taggtatgtt tataacatat
  acctatatat acatatactc acatatatat tatatacata tatatgtgca tatatatgca
  tatatataca tacctatacc tatatataca                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323886232	CHEV_12_8642867	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211875842					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:8686061 () rs orientation: forward

Symbol	Name	Function Class
Gm56531	predicted gene, 56531	within coordinates
Rr462644	regulatory region 462644	892 bp proximal
Tssr112727	transcription start site region 112727	1203 bp upstream
Tssr115717	transcription start site region 115717	965 bp downstream