rs211893974 SNP Detail

Summary

• ID
  rs211893974
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:25600322 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGAGACAAG TAgtccattg acatactgat
  gagcattcct gatctcctaa tgatctcagc agttaagtgc agtgagcttt ggttagtact
  tagatgagag aGTACTGTAT CCGTTACACA GCCATTGTAT ACAATGGCTA GTGTGCTAGA
  K
  TAACTTTTGG CTTGAAAATT TATGTCAGCA AGAACTTAAT CACTGATTAA TCTGTACTTA
  TGTCTCTATA TGTACCAGCA CTAGAACATA TTCTTCCCTG TATTATATGC AAATATGTTT
  GTGTTTGTCC CCATGTATGC ACAAGAATCC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320686440	CHEV_3_25445080	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211893974					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:25600322 () rs orientation: forward

Symbol	Name	Function Class
Gm55653	predicted gene, 55653	4 bp downstream
Nlgn1	neuroligin 1	within coordinates