rs211979532 SNP Detail

Summary

• ID
  rs211979532
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16059299 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    agagagggg gagacaggga gggagggagg
  gagggaggga gggagggaga gacagacaga gagagaaaga aagaaagaaa gaaagaaaga
  aagaaagaaa gaaagacaga cagacagaca gacagacaga cagacagaca gacagacaga
  M
  agaaagaaag aaaggtgtgt agcagcaggg aatggaaaac tatgtgtagc cactggaaag
  tcccagattc caggaaagca agaggctccc aggacccagt gtgaatgtca taagctgaaa
  tacccatcaa agtggagaac ctgtaaagac                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320670310	CHEV_3_15905135	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211979532					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16059299 () rs orientation: forward

Symbol	Name	Function Class
Gm5150	predicted gene 5150	within coordinates
Rr374567	regulatory region 374567	33 bp downstream
Tssr32658	transcription start site region 32658	1193 bp downstream
Tssr32659	transcription start site region 32659	1209 bp downstream
Tssr32660	transcription start site region 32660	1246 bp downstream