rs211995902 SNP Detail

Summary

• ID
  rs211995902
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:103469172 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGTC TCACAACTCA GGAGCCAAAG
  W
  GTTCTAGAAA GCAGAGTTCC AGGCA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324510570	CHEV_13_104122744	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211995902					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:103469172 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6053	CpG island 6053	624 bp proximal
Gm61201	predicted gene, 61201	within coordinates
Mast4	microtubule associated serine/threonine kinase family member 4	within coordinates
Rr485329	regulatory region 485329	1317 bp proximal
Rr485330	regulatory region 485330	1518 bp proximal
Tssr120897	transcription start site region 120897	114 bp downstream
Tssr120898	transcription start site region 120898	75 bp downstream
Tssr120899	transcription start site region 120899	56 bp downstream
Tssr123874	transcription start site region 123874	1765 bp downstream