rs212065183 SNP Detail

Summary

• ID
  rs212065183
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:53614670 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAACACATT AGATCTGAAA ACCAACTCTC AAATGTAGTA
  GCCACCTGGC ACTGCCCCAG CTCACCGGAA GATGTTACGG GGAGGTATCA TGGTGTGTGT
  R
  TGTGTGTGTG TGTGTGTTCG TTCTCGAGTG CACGCAGTGA GTACATGCAC ACTTCTCTGT
  CCCCAGCCCA CATCCATCAA CTGTATATAG TTGCTTTCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324342361	CHEV_13_53556003	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212065183					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:53614670 () rs orientation: forward

Symbol	Name	Function Class
Cpgi5621	CpG island 5621	1269 bp proximal
Gm33763	predicted gene, 33763	1435 bp upstream
Rr388456	regulatory region 388456	171 bp upstream
Rr480050	regulatory region 480050	1004 bp proximal
Rr480051	regulatory region 480051	1395 bp proximal
Rr480052	regulatory region 480052	1488 bp proximal