rs212087527 SNP Detail

Summary

• ID
  rs212087527
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:55419511 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cacaggctt agcctgttgt catcatgacc
  tgtaacatag tagcatagtg gcatacaggc agccatggtg ctggagagga agccaagagt
  tctacaactg agtggcagac atcagaatgt gagaatgcca actggcccta ggtgaacatc
  Y
  gagatctcaa tgcccacccc cagtgataca tttctttcaa ctacactgaa tctgctcgga
  caatagtgga ttcaccaaaa ctcttggtga gtttaagggc ccattttctt tcaaaccacc
  acaCCCATCA TTTGACTTTT TAAACTTTAG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319728271	CHEV_1_55437196	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212087527					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:55419511 () rs orientation: forward

Symbol	Name	Function Class
Cpgi265	CpG island 265	1421 bp proximal
Gm8531	predicted gene 8531	843 bp downstream
Rr371308	regulatory region 371308	1660 bp downstream