rs212089222 SNP Detail

Summary

• ID
  rs212089222
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:101206841 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAAGATGA GCTTGAACAA
  ATGAGCTTCC TAGGCAGTCT CCAAACTTCA CATTAATTAA TCATTTCAGC CCTCTTCCTC
  GGTAAACTTG TAACCAGAGC AGGTAACAGT GAGCAAACGG ATAGGCTTGA AGTTCATCTT
  CTTTTGTTTT CCTTGCTCAT TCTCTGGAAA AGGGGCTAAC GAGCAGTAAA ATGACCAGGC
  W
  CAGGATTCCA GAAGAGACGA GAGAGAGGGC CTGCCTGGGG AGCTGGCTGT GTAACCATCA
  CATAATTGGC TCTTGAATTA TCACAAGGTG CCCTACCATT TTATGATGCT GTCTGAGTTT
  TCCAGGTTCC AACGTTGATG GGGAATAAGG AGGAGATGGT GTTGCAGTTG GCACAGTGCT
  TGCTTCGTCC GCTGGGCTGG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323149620	CHEV_9_101231972	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212089222					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:101206841 () rs orientation: forward

Symbol	Name	Function Class
Rr198413	regulatory region 198413	41 bp distal