rs212141874 SNP Detail

Summary

• ID
  rs212141874
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:59075409 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTCTTGCTG AGATCCCTCA GTCATGGATC GATAGGTTTG
  GGGGGTGGGG ATTTATTATT ATTATTATTA TTATTATTAT TATTATTATT ATTATTATTA
  T
  TAAACTCTCC AGCTGGGAAA TAGACGTTAG CTCCTTTCCT CTGCCCCTCT CCCCCACACA
  GTCATGAAGG TCAGTGTAGG GACTGGAATA GAACAAGAC                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324355428	CHEV_13_59028956	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212141874					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:59075409 () rs orientation: forward

Symbol	Name	Function Class
Ntrk2	neurotrophic tyrosine kinase, receptor, type 2	within coordinates
Rr273008	regulatory region 273008	within coordinates
Rr284484	regulatory region 284484	85 bp proximal