rs212164160 SNP Detail

Summary

• ID
  rs212164160
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:33608901 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    agcacaagg caagacatag tcagctgctg
  tggacagtct gaagtaggcc cacatcccac acctgggatt aaaacgagaa catattctta
  aaacatttct gtgtgtttta aataattatt tatttatgta tctgtagctg ttttcacaca
  Y
  acaagaagag gacatcagat tccatcacag atggttgtgg gccatagtgt ggttgctggg
  aattgaactt aggacctctg ggagagcagt cCAGCCCCat ttttgtgttt tttaagaaaa
  ccaaaatccc aaaattgtcg ctacatcaat                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325139906	CHEV_16_33788617	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212164160					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:33608901 () rs orientation: forward

Symbol	Name	Function Class
Gm15657	predicted gene 15657	within coordinates
Gm15658	predicted gene 15658	within coordinates
Rr326609	regulatory region 326609	502 bp distal
Rr391607	regulatory region 391607	1636 bp upstream
Tssr140846	transcription start site region 140846	1512 bp upstream
Tssr140847	transcription start site region 140847	1399 bp upstream
Tssr140848	transcription start site region 140848	1355 bp upstream