rs212203671 SNP Detail

Summary

• ID
  rs212203671
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:24241367 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCCTGTAG ATGTGCAGGG
  AGGAGAGAGG GGAGAGGGGA GAGGGGGAGA GGGGGAGAGG GGGAGAGGGG GAGAGGGGGA
  GAGAGAGAGA GAGAGAGAGA GAATGAGTGT GTGTGTGTGT GTGTTTGTGT GTGTGTGCGT
  GTGTGTGTGT GTAGAACAGT TAAACTCCAG TGGTACCAAG CAGGGGAACC TCAGGCTTGG
  W
  GAGTGGAGAT TCTGGGGGAT TCTATAAGCA CCAACTAGTC TTACCACAAG GCTTAAATCC
  CATGGGTCTC AAGCTTTTCT GAGGTCAAGA CCTCAATTTT CTTCATTCTA ACTCTTTATC
  TTCAAACAGT GCTTTGGGCA AACATGCCTT ACCACCTAAA CTTGGAAAAC CTGGTCTGTT
  CTAGAAACCA GAATATTTGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324294183	CHEV_13_24149253	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212203671					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:24241367 () rs orientation: forward

Symbol	Name	Function Class
Carmil1	capping protein regulator and myosin 1 linker 1	within coordinates
D13Ertd224e	DNA segment, Chr 13, ERATO Doi 224, expressed	515 bp proximal
Tssr121764	transcription start site region 121764	1905 bp downstream
Tssr121765	transcription start site region 121765	1936 bp downstream