rs212213996 SNP Detail

Summary

• ID
  rs212213996
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:3670735 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTGCTGGC AGGAAATTCC
  TTGTTTTACT TTCAAACAGC AACTGCACAG CAGAGCACCA GACTCACAGG AGATGACTAT
  GTATCTGCCC AGCACTTAAC AACTTCTGCT GTTGAATGAC AGCTGGTAGC TAGTTGTAAC
  TGAGACTGAT GGCATCCTGA ATCCTAGTCT GCTAATACCC TTAAATGTGG ACTCTCCATC
  Y
  ACTCTTTCAA CTATCAAGTA TTGGTAGCTG AGTGTCTCCT AAGTGGGAGA CTCTGTACTG
  TCTGGTGGGT GGGTGGGGCA TGAAAACATC ACAGTTGGTT TTCAGGTCCC AAAGAAATAA
  ATGGCTAACT GATGTGTCTA TTAGCATGCC AAAAACACAT CGTTGGCCTT TTTAGGATCA
  CTCAGTACCT GTGGCTCCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320204861	CHEV_2_3586970	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212213996					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:3670735 () rs orientation: forward

Symbol	Name	Function Class
Gm50615	predicted gene, 50615	within coordinates
Rr372694	regulatory region 372694	within coordinates