rs212230870 SNP Detail

Summary

• ID
  rs212230870
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:101831877 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCTCTCTG TGTGTGTGTG
  TGTGTGTGTG TGTGTGTGTG TGTGCATGCA GGAAACACAA ATTCTCTTCC TGGTGTCTCT
  CTGAGACTCA ATTTTGCCCA GCTGCAGCAA ACTCAAGCTA ATCAATTGCA GCCGAACTCA
  GTAATTACAG ATGTGAACGT GAACCCTTCT GGATTTTCTT GTCTTTCCTC TCAGAGCAGC
  W
  CTGTAGTTCC AGGTCCTTCT GGGCACAGGG GAAGGAGCAG AAAGATGAGG TGAGCCAGCC
  ATGGTCACAG CCATCTGTCT TCCTTAGCCT CCTGGGAGCA GTCCTGTCCC CCACTCCCAC
  CCTGCCTGCA CCTTGTTCAC GTTGGACTCA GCCTTTCCCA GCCAATGCTT CTGACTCCGC
  ACACAGTGCC CCCTTGGCCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323834290	CHEV_11_101802365	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212230870					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:101831877 () rs orientation: forward

Symbol	Name	Function Class
D11Mit146	DNA segment, Chr 11, Massachusetts Institute of Technology 146	1387 bp proximal
D11Mit332	DNA Segment, Chr 11, Massachusetts Institute of Technology 332	135 bp distal
Gm74450	predicted gene, 74450	1101 bp downstream
Rpl27-ps2	ribosomal protein L27, pseudogene 2	1152 bp downstream