rs212242720 SNP Detail

Summary

• ID
  rs212242720
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:94561188 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTATGAAGC TCCCTCTCAA
  GGATTCCTTC ACGTGTCATT GGCTGAGCTA AGGTAACATA ATATTCCAGA GCCAATTGTC
  AGCAAGGGGA AGAAAGAAGG TGCCTGGAGC TAAGGATGAA GTCAGTTTAC CTGGAGCACA
  TGGCCAAAAT AGGCATAGAA ATAGGCAGCC AACAACCATA ACAAAGTACC AAACCCCCAA
  M
  CCCCCCAAAC CAGGGCATTT TCTATGTGGG GTGTGTGTGT GTGTGTGTGT GTGTGTGTGC
  AATATCAGCT CCTAGTGAGG TGCTAGCAAG AGGACCATGA GTTTGAGACC CTGTCACAAA
  AGAAACAAAT AGAACTTTGT TAAGTGAAGG GACAGAGAGA GAGAGAGAGA GAGATAACAA
  AGATAGTTTT AGGGGACATA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323093456	CHEV_9_94579554	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212242720					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:94561188 () rs orientation: forward

Symbol	Name	Function Class
Rr383780	regulatory region 383780	580 bp upstream
Rr684730	regulatory region 684730	1218 bp proximal
Slc9a9	solute carrier family 9 (sodium/hydrogen exchanger), member 9	within coordinates