rs212244539 SNP Detail

Summary

• ID
  rs212244539
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:120757776 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATAACACTA ATTAAGACAT
  GTTACTTGTA CGTATGTTTT CAGTGCTGAC CATTTGACAC TATACAACTA ATTGGTATAC
  TCATTCCTTA CCTCTCTTAC TGCCAGATTT ACTTAGTTGC TTGTATTTCT TAGTGTAGGG
  TTGAAGTCTC ATGGCCTTTT CTTCATATAA TATTACATGT CTTTTGTCCT TGTTCAGTAT
  R
  TGTTTGGGCA GTCCTATTGG TATATATATA TATATCATGA GAAAAAAAAC TCTCACAGAA
  AATTCCGTGA TTTATAATAT ATTCACCCCT TCATTCTGCA ATGATTCCTG AACATTTTAT
  GTAAATGTGT TTTATAAATG TATCTACTAA GAGTCTGCAC TTTGATTGGT TGGACTTTTC
  TAGAGTGGTC TCTGCTTCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325960966	CHEV_X_118961688	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212244539					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:120757776 () rs orientation: forward

Symbol	Name	Function Class
Rr395603	regulatory region 395603	619 bp downstream