rs212256062 SNP Detail

Summary

• ID
  rs212256062
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:11888760 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTCTAACCC AGAAGTAGGG
  TGATGAATGG CTGTTGCAGG GCTAAGGCCA ACTCTGGATT GTTTGGATGT AGAGCTGTAT
  CATTCCAGCT CTTCACTGCT CTAACCAGGC CCTCGGCTTT GCAGATTGTG TAACGGATAT
  GTGGTTGGTT GTCTTCTGGG GCTTAGGGCT TACTGTCAAC AGGTAGCACA CTAGTGACCA
  M
  GGAAAGGCGA GCTTCTCTGA CTAGAAGAGG GGTCTCATTC ACCACTGACC CAGTGTCCGC
  CTGGGAAGTG AAGGCAGAAA GAGGGTGCAC AGGTCACAGA AACCCCACTG GAACACTCAC
  CGCTGCCAAC GATAGTGTTT GTGTAAAAAA TATAAACGTG TGTTCGAAAC CATGGTGCAA
  GATAGAATAT TTGTCTAGAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322494087	CHEV_8_11838760	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212256062					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:11888760 () rs orientation: forward

Symbol	Name	Function Class
Gm15875	predicted gene 15875	202 bp downstream
Tex29	testis expressed 29	1728 bp upstream
Tssr76253	transcription start site region 76253	1741 bp upstream
Tssr76254	transcription start site region 76254	1754 bp upstream
Tssr76255	transcription start site region 76255	1808 bp upstream