rs212297492 SNP Detail

Summary

• ID
  rs212297492
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:75209817 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATATACAA AAGCTCTTTG
  GAGTCCTCAT AATTATTAAG AGTATAATGT AAGGCCAGAG AGATGGCTCA GTAGTTCAGT
  TTTCAGCATC TGCATTGTGA GTCTCCCAAT TACCTACAAT GCCAGCTCCA GAGAATCTGA
  TGCCCCCTTT TGACCTCTGT GGGTTCTGCA CACACATTAA ATTTTTTAAT TTTAAAAGTG
  Y
  ATTTGGTTGG TTTTGTAAGA CAGAATTTCT CTGTGTAGCC CTTGCTGTAC TGGAACTGTA
  GACCAGGCTG GCCTCGAACT TAGAGATCTG CCTGCCTCTG CCTCCTGAGT GCTGGGACTA
  AAGGCGTGCA GACTAAAAGA CTTGGCAGTT TTTTGAAATG TAAAGGGTAG AAAGCAATGC
  TGATAACAAA GGAACAAATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323007843	CHEV_9_75150342	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212297492					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:75209817 () rs orientation: forward

Symbol	Name	Function Class
Myo5c	myosin VC	within coordinates
Rr197409	regulatory region 197409	17 bp distal
Rr197410	regulatory region 197410	384 bp proximal