rs212357653 SNP Detail

Summary

• ID
  rs212357653
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:56498864 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGACTTCAT GTCCCCCGAT
  GATCTCCCCT GAAGGGAAAG CCAATCATTT TGTGGGCACC TGCTAGATCA CCAGATGGGT
  TTTGTCTGGT AGCTCCAGAC TTGCTAGGCA TTTGGGAGCC AGGGAGTCCT GGAGTTGGAA
  GGAGGTTGGG AGGAGTGCCC TCATTTTCCC CTTCTTTAAA AGGAGAGAAA TATAGGTCTT
  R
  GCTTATCAAT CTTCCTTCCA CACAGTTGGA GGCAAACATA ATTCTCTGGA CAAGGAAATC
  CTAAGGATTC AGCTTGTCTG TCTTCTGACT TCTGGTCCCA GAGTTTCTAA GACCTTCTCT
  CCCTTGCTCC CAGCCCTGTG ATGCCTGGAA TACTGCTGCT TTCTAGGGGC CAAAGTTCAC
  ACTTCACAGC ATCTTATTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324645031	CHEV_14_56880244	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212357653					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:56498864 () rs orientation: forward

Symbol	Name	Function Class
Gzmb	granzyme B	within coordinates
Rr295614	regulatory region 295614	762 bp proximal
Tssr128924	transcription start site region 128924	765 bp downstream
Tssr128925	transcription start site region 128925	810 bp downstream
Tssr128926	transcription start site region 128926	826 bp downstream