rs212365227 SNP Detail

Summary

• ID
  rs212365227
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4415895 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTAACTGC CTATAAAATA
  TAGTTTGCAC ACTCTATTGA CATTCATTCA CATTGAGTCA TGGCCTAATT TTGCATCCCA
  CAATTTCTTA TGAGCCTTAA TATGCTTCTA GACTTTATGA CTGTCATTTG GTTTTTGACT
  GTACATGTAC AAATGTAAAT ATAGAGACTG TTGGTAATAT GTCTTATTTA ATATACCAAA
  Y
  GATCTCAATG TGTTTTGCTA CAACCCCAAA CAGCCTTTGA AAAGTGACTG TGTGGTTTCA
  AGTCAATGAA TTTCAATGTC AACCTCACTG CCAACAACAT GATGACCAGG GTGGGGTGCC
  TTTTTTCTAA AGGATTTGTA AGCCAGTGTC TAGTGAAATA ACACTGTGCT GGGCTCTCGG
  GTGGGTTTGA GGCTATCGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321727405	CHEV_6_4365895	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212365227					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4415895 () rs orientation: forward

Symbol	Name	Function Class
Rr626012	regulatory region 626012	1425 bp distal
Rr626013	regulatory region 626013	1519 bp distal
Rr626014	regulatory region 626014	988 bp proximal
Rr626015	regulatory region 626015	1029 bp proximal