rs212430457 SNP Detail

Summary

• ID
  rs212430457
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:115169543 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATGG GTTATGAGAC TGTAGGTGTA
  R
  TAATGTGACC TACAACCAGA CTGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323862219	CHEV_11_115140031	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212430457					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:115169543 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4117	CpG island 4117	1256 bp distal
Fads6	fatty acid desaturase domain family, member 6	905 bp downstream
Fdxr	ferredoxin reductase	1667 bp upstream
Gm74405	predicted gene, 74405	within coordinates
Rr231868	regulatory region 231868	1058 bp proximal
Rr246090	regulatory region 246090	542 bp distal
Rr403113	regulatory region 403113	1380 bp downstream
Tssr105852	transcription start site region 105852	1288 bp downstream
Tssr111738	transcription start site region 111738	1811 bp upstream
Tssr111739	transcription start site region 111739	1774 bp upstream
Tssr111740	transcription start site region 111740	1745 bp upstream
Tssr111741	transcription start site region 111741	1733 bp upstream