rs212487978 SNP Detail

Summary

• ID
  rs212487978
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:61926572 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGACAAGCA TCTTGGGTCT
  CGTGATGTTT GTTTTGATCC AGGTGGCCCA GTGTGTTAGG GACTGGGAGG AAGGCACACT
  TATGTTACAG TCAGGTGTGG TACTGGGAAC CAGAGATGGC ATAAGGCTAT GGGCGATCTT
  TTCCAGGGCT GAAAGACAAA CTCCTAAACC TTTGTACTGG CTTTTCCATT TCCCCAGCGA
  Y
  TCACACATCT TGCCATGAGC TTTCACAGGG ACAGATACAT GCCCCATTGG GTTGTGGTCA
  CCCCTCACAT GGGCGGCACA TAAGACTACA TTGTCAGCAT TAATACAGCG TGTTTGTCAT
  AACTCTTTTG GGCAGAATTC AAAGCAACTT AAACCCAAAG TCTGATGTCG GGGGAAAAGC
  TGCCTTTAAA GAGAGCACAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325645770	CHEV_18_61953155	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212487978					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:61926572 () rs orientation: forward

Symbol	Name	Function Class
Gm35919	predicted gene, 35919	1352 bp downstream
Rr346544	regulatory region 346544	372 bp distal
Rr346545	regulatory region 346545	29 bp proximal
Rr351728	regulatory region 351728	427 bp distal
Rr354902	regulatory region 354902	1172 bp distal
Rr356351	regulatory region 356351	193 bp proximal