rs212497415 SNP Detail

Summary

• ID
  rs212497415
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:15874226 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGGATAGAT GGATGGTGGA TGGATGAGTG AGTATACACA
  TGGATAGGTG GGATGGATGG ATAGGTGGGT GGACACATGG ATGGATGGAT GGATGGGTGG
  K
  TGGGTGGACA CAAATATAGA GAGAAGGTTG GATAGGTGGG TGGATGTGGG TGTTGGATGG
  ATGGGTGGAT ATGTGGGTGG ACACACAGAT GGATGTGAT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322108678	CHEV_7_16725650	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212497415					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:15874226 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi18356	CpG island 18356			129 bp proximal
Slc8a2	solute carrier family 8 (sodium/calcium exchanger), member 2			Intron
				Noncoding-Transcript-Variant