rs212535978 SNP Detail

Summary

• ID
  rs212535978
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:149696983 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttcccagaa gattccatct cacttaaaat
  gctgatcttt tctaaatcac tgctaatttc ttagttctag ctaaccagca tcaattgtgc
  aggagtccct tctatccctg actctaaagc tagaagtaca tggccaaagt tactgatttc
  Y
  agtacttgct ggggcttgtt ctataacagc agcagcagca acaacaacag caattttatg
  ttttctaact ccttcactgc ctaagctcag ctgtcctgga atttgctctg tagattgacc
  ttgaactcag agatctacat ggttgtctcc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320042537	CHEV_1_151668362	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212535978					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:149696983 () rs orientation: forward

Symbol	Name	Function Class
Rr372218	regulatory region 372218	1448 bp upstream