rs212550588 SNP Detail

Summary

• ID
  rs212550588
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:184582065 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTAATTGA ACCTTCTGGG
  CTTCCACTGC CCTGGTTGTA AAGTGATGGG TTACAGCTTA GGCATAGCTA TAGATGCTGG
  ATTTCACAGA TCTGGGCTGT TTCTGAGCTC TGTGATCAGA CCAGTGAGGG CCTTCGCCAT
  AGTGAATGCC AGTCCTCTGC TCTCTGAGCT CACCATTACC CAATATGTGC CCTGCCAGGA
  Y
  GCCCTGTCCC AGTGGCTTTT AGCAGAGAAG CCTCCTATCC GTCACCTTGG CAGACCCCCT
  TGTCTGCAGC AGTAGCTGAC GGGAGGCTGG GGACCACCAC TCGTCTATCT GCTTTGCTTT
  TCACTGTTCT TGGTTTAAAT GATGGGGAGA GAAGGAAAAC AGCAAGGAAG TGTTTCCTCA
  CTGAGCACTT GGCTTCAGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320169893	CHEV_1_186673747	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212550588					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:184582065 () rs orientation: forward

Symbol	Name	Function Class
Gm34451	predicted gene, 34451	within coordinates
Rr372580	regulatory region 372580	within coordinates
Rr425307	regulatory region 425307	1250 bp proximal