rs212566632 SNP Detail

Summary

• ID
  rs212566632
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:115818617 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGGGTATT GCTTATAGGC
  TTGCTCAGCT TGTTTTTTTA TAGAACTCAG GGCTACCAGT CCAGGGAGTA GCCCCACCCA
  CAGTGGGCTG GGCCCTCCCC TGTCAATCAC TAGTTAAGAC AATGCCCTCC AGGCTGGCTT
  CCATCCTGGT TTATAGAGGC ATTTTCTCAA TTAAGGCTCC CTACTCTCAA CTCAAGTTGA
  Y
  GTAAAGCCAG CACAGTGACA TTTACCTTAA CGTTATGTGT GACATTCTTT CCTTCCCCTG
  TTCAACAGTT TCTCCGGCGT GTGATTTTTT TTTTTTTTAA GTATGTTGGC TTTGTTACGT
  GTTCATTAGT TTCTGAGTGG ATGTGTTATA ATTGCATGGT GGTATTTTTC CTTCAGGCAG
  ATTTTGTTTT CCCCTGTTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320893979	CHEV_3_115727886	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212566632					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115818617 () rs orientation: forward

Symbol	Name	Function Class
Extl2	exostosin-like glycosyltransferase 2	Intron
Rr583641	regulatory region 583641	842 bp proximal