rs212605679 SNP Detail

Summary

• ID
  rs212605679
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:46037594 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCAGGCAGG TGCTGGTGTT
  TGAGAAGCCA GGGCCACGTG CAGGGTGAGG CCCAGAACAA GGGCCACACC TACTGGAGGC
  CCTTTCCAGC CCAGAGCCTC ATGCTGCAGT GACAGGGCAC TTCTGTTCCT GGCTTCCAAG
  GGCCCTTTTG AAAAGCAGCA GGTGCTTTCA CCATAGCAGT TCTGAGGTTG ACCTGGTCTC
  Y
  CCTTCCCTAG CCCCCAGCCC TAGAGTATTG GGAAGTGTAC CTGAGACACC TTACTACTCC
  ACAGCTATTT CAGAGTTTTC TCTGCAGTGA GGACCCCTCT GAAAGGGAGA AACAGATCAG
  CTGCTAACTC CAGGAGCTTG TGACGAGGGA TGGCCTTGCT TTCTTTTGTT CCAGCCTTTG
  CTCTTGGTTA GAGGTTCTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325403930	CHEV_17_45863617	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212605679					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:46037594 () rs orientation: forward

Symbol	Name	Function Class
Gm35456	predicted gene, 35456	within coordinates
Rr331486	regulatory region 331486	1794 bp distal
Rr331487	regulatory region 331487	207 bp proximal
Rr339880	regulatory region 339880	1993 bp distal
Rr339881	regulatory region 339881	193 bp distal