rs212686596 SNP Detail

Summary

• ID
  rs212686596
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:11504017 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGCAGTGG TTCCATCACA
  CAGTTGGATC TTTGGGTTAG AAAAACCTGT ACCCTTCACA GGTCTCTCTG TGCTCTGACT
  CAAACTTCCT GATGCGCACA CCTCTTGTAC CAAGTGGAGA AGCATATTTT GATCCCAGCA
  TATCTGTTGT TCCCTCAAGG AAATTCACCA CCAGACTGTG TTGTTTGTAC TTTCTGTGAA
  Y
  GCTTCTCAAT CTATCTCTGC CATCTCTGTT ATCTATCTCT TCATCATCTA ACATCTCTTA
  TGTTTTCTCT GTTCTCTATC ATCTCTATAT CTAGTATTGT TCATCTATTG TTATTTCTCT
  AGCATCTTCA TCTTTCTCTC TCTATCACCT CTAGCTCTGT CCACCATCTC TGTCTCTGTC
  ATCTCTACAT CTAGTCATCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324264594	CHEV_13_11581398	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212686596					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:11504017 () rs orientation: forward

Symbol	Name	Function Class
D13Ertd463e	DNA segment, Chr 13, ERATO Doi 463, expressed	1014 bp distal
Rr387978	regulatory region 387978	654 bp upstream