rs212697998 SNP Detail

Summary

• ID
  rs212697998
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:120087201 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAACTAACTA AGAAGAGCAG
  CTTGTGCTTG TAACCACCAA GCCAACCACT AACCACTCTT CAGCCCTCTT TTCTTCTCTT
  TAGTGGCTGA GACTCAATCG TATGGATACC CTGCACTTTA CCAGTTTGTT TGCAAGCATT
  GTCACCAGTC CAAATTCATT TCTAAATTTA AAAACCAAAC AAACAAACAA TATTGATTTG
  Y
  TTCTGTCACA AGGCCTGGGA TGAACCATCC CTGGTGGTTC TAGCTATGTC CTGTGCAGTT
  GCGACCTTGG GGTCACTACT TGTCCAGTGT CATGTTCATT GTTGACTAGT TTTCTCAGAC
  TGACCAGCTA GCTTAGAATA AAGACAATGT TGCAGCGTCT TCCAAGAAAT CCTCATATTT
  TTCTGTATCT CTGCAAGGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323226208	CHEV_9_120167253	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212697998					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:120087201 () rs orientation: forward

Symbol	Name	Function Class
Gm38642	predicted gene, 38642	1089 bp downstream
Gm47059	predicted gene, 47059	within coordinates
Rr207892	regulatory region 207892	1201 bp proximal