rs212706234 SNP Detail

Summary

• ID
  rs212706234
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:109905533 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTTTCGGT AGCACTTTTA
  AACTTCAGTT TAAAATGTAA GTTGTTGCTA AGGTAAAGTT TGCATTTGGA ATCTGTGTAG
  ACCAAACCCA GTGCCCCATG CTCTACAAAT GAGCAAACCT CTTTGGCCCC ATGCATTATT
  TTATGTCATA GGTCAAAGCC CAGCCTAATT AAGGGATTAG TTCAAGGTCA CACAATTAAT
  Y
  AAAAGATGGC AACTTGCTGC CAGCCCTTCT TGATGGCAGC TGCTCCAAGC AGGCTACTGG
  GTCGACTGTG TCATCTAGGA TAGGAGCAGC AGGAACAGTG CTTTGTGGAA GTGTACAGGG
  TTCAATCAGT ACACAGGGCT GCACACAGAT GCCACATGGC TGCTATCCTG AGCCACAGGA
  GCGTCTGTAT CTGTAACAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322395862	CHEV_7_117449840	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212706234					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:109905533 () rs orientation: forward

Symbol	Name	Function Class
Rr159222	regulatory region 159222	532 bp distal
Rr159223	regulatory region 159223	133 bp distal
Rr159224	regulatory region 159224	468 bp proximal
Sbf2	SET binding factor 2	1687 bp downstream